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Muhammad Ibrahim Syed, Senior Postdoc Fellow (Clear Cell Sarcoma of Kidney (CCSK))

Muhammad Ibrahim Syed

Senior Postdoc Fellow (Clear Cell Sarcoma of Kidney (CCSK))·National Children’s Research Centre, Trinity College Dublin, Ireland

Ireland

Doctorate, Doctor of Philosophy (Ph.D.) in Biochemistry

Work experience

Total years of experience: 3 years, 2 months

Senior Postdoc Fellow (Clear Cell Sarcoma of Kidney (CCSK))

May 2023 - Present

National Children’s Research Centre, Trinity College Dublin, Ireland

Ireland

May 2023 - Present

Essential tasks • To investigate the effect of Internal Tandem Duplications (ITD) in BCOR protein on Non-canonical Polycomb Repressive Complex 1.1 assembly in engineered-HEK293 cell line.
• To analyze the methylation landscape in YWHAE-NUTM2B (fusion protein)- engineered cell line.
• To analyze changes at chromatin (CHIP-Seq) and transcriptome (RNA-Seq) level in CCSK.
Techniques learned/performed:
DNA methylation (EPIC Array), CHIP-Seq, RNA Seq, IP-Mass Spectrometry and Western Blotting.

Company industry:
Medical Hospital
Job role:
Research and Development

Education

Interfaculty Institute of Biochemistry (IFIB), Eberhard Karls Universitä

August 2019

August 2019

Doctorate, Doctor of Philosophy (Ph.D.) in Biochemistry

Germany

Skills

CLONING (BIOLOGY)
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CLONING (BIOLOGY)
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FOURGEN COMPUTER-AIDED SOFTWARE ENGINEERING (CASE) TOOLS
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FOURGEN COMPUTER-AIDED SOFTWARE ENGINEERING (CASE) TOOLS
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FRACTIONATION
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FRACTIONATION
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IMAGING
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IMAGING
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MICROSCOPY
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MICROSCOPY
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TRANSCRIPTION (GENETICS)
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TRANSCRIPTION (GENETICS)
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BIOCHEMISTRY
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BIOCHEMISTRY
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CENTRIFUGATION
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CENTRIFUGATION
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IMMUNOPRECIPITATION
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IMMUNOPRECIPITATION
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LOCALIZATION
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LOCALIZATION
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Languages

Urdu

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English

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German

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